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2021
Jacobus APaula, Stephens TG, Youssef P, González-Pech R, Ciccotosto-Camp MM, Dougan KE, Chen Y, Basso LCarlos, Frazzon J, Chan CXin et al..  2021.  Comparative Genomics Supports That Brazilian Bioethanol Saccharomyces cerevisiae Comprise a Unified Group of Domesticated Strains Related to Cachaça Spirit Yeasts. Frontiers in Microbiology. 12
González-Pech RA, Stephens TG, Chen Y, Mohamed AR, Cheng Y, Shah S, Dougan KE, Fortuin MDA, Lagorce R, Burt DW et al..  2021.  Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium. BMC Biology. 19(1)
Zinke LA, Evans PN, Santos‐Medellín C, Schroeder AL, Parks DH, Varner RK, Rich VI, Tyson GW, Emerson JB.  2021.  Evidence for non‐methanogenic metabolisms in globally distributed archaeal clades basal to the Methanomassiliicoccales. Environmental Microbiology. 23(1):340-357.
Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd LM, Wick R, Holt KE et al..  2021.  Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium. Current Biology. 31(7):1393-1402.e5.
Robbins S.J, Song W., Engelberts J.P, Glasl B., Slaby B.M, Boyd J., Marangon E., Botté E.S, Laffy P., Thomas T. et al..  2021.  A genomic view of the microbiome of coral reef demosponges. The ISME Journal.
Mason OU, Chanton P, Knobbe LN, Zaugg J, Mortazavi B.  2021.  New insights into the influence of plant and microbial diversity on denitrification rates in a salt marsh. Wetlands. 41:1–14.
Ahmed W, Tscharke B, Bertsch PM, Bibby K, Bivins A, Choi P, Clarke L, Dwyer J, Edson J, Nguyen TMinh Hong et al..  2021.  SARS-CoV-2 RNA monitoring in wastewater as a potential early warning system for COVID-19 transmission in the community: A temporal case study. Science of The Total Environment. 761:144216.
Coleman A, Bialasiewicz S, Marsh RL, Håkansson EGrahn, Cottrell K, Wood A, Jayasundara N, Ware RS, Zaugg J, Sidjabat HE et al..  2021.  Upper Respiratory Microbiota in Relation to Ear and Nose Health Among Australian Aboriginal and Torres Strait Islander Children. Journal of the Pediatric Infectious Diseases Society.
2020
Leu AO, Cai C, McIlroy SJ, Southam G, Orphan VJ, Yuan Z, Hu S, Tyson GW.  2020.  Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae. The ISME Journal.
Engelberts JP, Robbins SJ, de Goeij JM, Aranda M, Bell SC, Webster NS.  2020.  Characterization of a sponge microbiome using an integrative genome-centric approach. The ISME Journal.
Glasl B, Robbins S, Frade PR, Marangon E, Laffy PW, Bourne DG, Webster NS.  2020.  Comparative genome-centric analysis reveals seasonal variation in the function of coral reef microbiomes. The ISME Journal. 14(6):1435-1450.
Bowerman KL, Varelias A, Lachner N, Kuns RD, Hill GR, Hugenholtz P.  2020.  Continuous pre- and post-transplant exposure to a disease-associated gut microbiome promotes hyper-acute graft-versus-host disease in wild-type mice. Gut Microbes. :1-17.
Vanwonterghem I, Webster NS.  2020.  Coral Reef Microorganisms in a Changing Climate. iScience. 23(4):100972.
Ahmed W, Bertsch PM, Angel N, Bibby K, Bivins A, Dierens L, Edson J, Ehret J, Gyawali P, Hamilton KA et al..  2020.  Detection of SARS-CoV-2 RNA in commercial passenger aircraft and cruise ship wastewater: a surveillance tool for assessing the presence of COVID-19 infected travellers. Journal of travel medicine. 27:taaa116.
Ramsby BD, Heishman J, Hoogenboom MO, Whalan S, Webster NS.  2020.  Dissolved inorganic nutrient enrichment does not affect sponge growth or condition. Marine Ecology Progress Series. 634:77-88.
O’Brien PA, Tan S, Yang C, Frade PR, Andreakis N, Smith HA, Miller DJ, Webster NS, Zhang G, Bourne DG.  2020.  Diverse coral reef invertebrates exhibit patterns of phylosymbiosis. The ISME Journal.
Li Z, Hentschel U, Webster N, Olson J, Häggblom M.  2020.  Editorial: special issue on sponge microbiome. FEMS Microbiology Ecology. 96(5)
Shaffer MR, Luter HM, Webster NS, Wahab MAAbdul, Bell JJ.  2020.  Evidence for genetic structuring and limited dispersal ability in the Great Barrier Reef sponge Carteriospongia foliascens. Coral Reefs. 39(1):39-46.
Ahmed W, Angel N, Edson J, Bibby K, Bivins A, O'Brien JW, Choi PM, Kitajima M, Simpson SL, Li J et al..  2020.  First confirmed detection of SARS-CoV-2 in untreated wastewater in Australia: a proof of concept for the wastewater surveillance of COVID-19 in the community. Science of the Total Environment. 728:138764.
Bandara H.MHN, Wood D.LA, Vanwonterghem I, Hugenholtz P., Cheung B.PK, Samaranayake L.P.  2020.  Fluconazole resistance in Candida albicans is induced by Pseudomonas aeruginosa quorum sensing. Scientific Reports. 10(1)
Luter HM, Kenkel CD, Terzin M, Peirce T, Laffy PW, Gibb K, Webster NS.  2020.  Gene correlation networks reveal the transcriptomic response to elevated nitrogen in a photosynthetic sponge. Molecular Ecology. 29(8):1452-1462.
Chaumeil P-A, Mussig AJ, Hugenholtz P, Parks DH.  2020.  GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database. Bioinformatics. 36(6):3.
Delogu F., Kunath B.J, Evans P.N, Arntzen M.Ø, Hvidsten T.R, Pope P.B.  2020.  Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomes. Nature Communications. 11(1)
Allard SM, Costa MT, Bulseco AN, Helfer V, Wilkins LGE, Hassenrück C, Zengler K, Zimmer M, Erazo N, Rodrigues JLMazza et al..  2020.  Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems. mSystems. 5(5)
Bolduc B, Hodgkins SB, Varner RK, Crill PM, McCalley CK, Chanton JP, Tyson GW, Riley WJ, Palace M, Duhaime MB et al..  2020.  The IsoGenie database: an interdisciplinary data management solution for ecosystems biology and environmental research. PeerJ. 8:e9467.

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